BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB034C04LP1|AL429872
(876 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1746 1664 0.0
>3x_Contig1746
Length = 26672
Score = 1664 bits (837), Expect = 0.0
Identities = 867/877 (98%), Gaps = 2/877 (0%)
Strand = Plus / Plus
Query: 1 gaccatgacaccagctttagaaatagaaaaggtgatattagtgaatcagctgaagatatc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1757 gaccatgacaccagctttagaaatagaaaaggtgatattagtgaatcagctgaagatatc 1816
Query: 61 aatctagtttccgctggagtttttttaagtgaaattcctcataagaaaccaaaggaaagc 120
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 1817 aatctagtttccgctggagtatttttaagtgaaattcctcataagaaaccaaaggaaagc 1876
Query: 121 aatttccaattgcaacacgtcgataggatcgtcgatgaatcggtctgtwaccatgataat 180
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 1877 aatttccaattgcaacacgtcgataggatcgtcgatgaatcggtctgtaaccatgataat 1936
Query: 181 ccgatatttttagagaatatcaggagaaacagtgtcaacaacactaaaatgcatccacta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1937 ccgatatttttagagaatatcaggagaaacagtgtcaacaacactaaaatgcatccacta 1996
Query: 241 gagttgaattcggatcatgttaggcaccgctctaaatcgctaaacaataattgcggtatg 300
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 1997 gagttgaattcggatcatgtaaggcaccgctctaaatcgctaaacaataattgcggtatg 2056
Query: 301 gatttcaatttatgtyttgatagctccaaaatgcttactagacggaaaacaaaggtatca 360
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2057 gatttcaatttatgtcttgatagctccaaaatgcttactagacggaaaacaaaggtatca 2116
Query: 361 ctggaacgactcacttaacggaattaaagagatgagaactactttttcacgatagcaact 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2117 ctggaacgactcacttaacggaattaaagagatgagaactactttttcacgatagcaact 2176
Query: 421 tcaatacatataaacg-tgcagtacatatgatatactcgaccatacattcgcatatyagc 479
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 2177 tcaatacatataaacgctgcagtacatatgatatactcgaccatacattcgcatatcagc 2236
Query: 480 attttttttwatcatttcgtatgttgtagcgtttttcacatttttattggcgttcctaac 539
||||||||| |||||||||||||| |||| ||||||||||||||||||||||||||||||
Sbjct: 2237 attttttttaatcatttcgtatgtcgtagagtttttcacatttttattggcgttcctaac 2296
Query: 540 agattgcgattgaatcagcctaccgtttatttgatcgtttgctctaaatctttgtatgcc 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2297 agattgcgattgaatcagcctaccgtttatttgatcgtttgctctaaatctttgtatgcc 2356
Query: 600 ttcctctaaagacaggcaaataccagatttaacatgacgtttggccactctttgttcgat 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2357 ttcctctaaagacaggcaaataccagatttaacatgacgtttggccactctttgttcgat 2416
Query: 660 aacatcttcatcaatcacgatattccaaaaaataaatgcacccgtgcttgctatggcatc 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2417 aacatcttcatcaatcacgatattccaaaaaataaatgcacccgtgcttgctatggcatc 2476
Query: 720 gtatattagactccagttctcttgatttaagagaagatagagtccttctagaattagtat 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2477 gtatattagactccagttctcttgatttaagagaagatagagtccttctagaattagtat 2536
Query: 780 tcttgtaaatttatgaactgtatgctggtcagccactggatctttaattgcatgatcaaa 839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2537 tcttgtaaatttatgaactgtatgctggtcagccactggatctttaattgcatgatcaaa 2596
Query: 840 cccgggggaaagatatttcaggtaagtctataaagct 876
||| |||||||||||||||||||||||||||||||||
Sbjct: 2597 ccc-ggggaaagatatttcaggtaagtctataaagct 2632
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6305
Number of Sequences: 1807
Number of extensions: 6305
Number of successful extensions: 40
Number of sequences better than 1.0e-20: 1
length of query: 876
length of database: 10,358,551
effective HSP length: 16
effective length of query: 860
effective length of database: 10,329,639
effective search space: 8883489540
effective search space used: 8883489540
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.4 bits)
S2: 50 (99.9 bits)